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GPU Test Drive for BARRACUDA

GPU Accelerated for Faster BARRACUDA
BarraCUDA is a novel sequence mapping software that utilizes the parallelism of NVIDIA CUDA graphics cards to map sequencing reads to a particular location on a reference genome. While delivering a similar mapping fidelity as other mainstream programs , BarraCUDA is a magnitude faster in mapping throughput compared to its CPU counterparts. The software is also capable of supporting multiple CUDA devices in parallel to further accelerate the mapping throughput.
GPU Performance
A comparison of mapping performance between BWA (CPU, orange bars) and BarraCUDA (GPU, green bars).
A sequencing read library containing 14 million 95 bp reads was mapped onto the Drosophila Melanogaster genome.
The test was performed on a dual-socket computer node containing 2x 6-core Intel Xeon X5670 (2.93GHz) and
8X NVIDIA Tesla C2050s
Free GPU Test Drive - Powered by NVIDIA Pascal GPUs and Intel Xeon E5-2600 v4 Series CPUs
For Amber users, Exxact is offering a special opportunity to remotely simulate your molecule file using a Pascal-based systems for free. No obligations or strings attached. The Exxact test drive program will provide you GPU computing systems and registered applications that are thoroughly tested to ensure interoperability. Sign up now to experience the acceleration.

It's easy to try in three steps:
1. Register
2. Upload your data
3. Run your application and get faster results.
GPU Test Drive Systems:
Tesla P100 SXM2 Server Tesla P40 Server Tesla Pascal GPU Cluster
(Contact us for more information)
• 2x Intel Xeon E5-2620 v4 CPU's
• 4x NVIDIA Tesla P100 SXM2 16GB CoWoS HBM2, NVLink
• 8x 16GB DDR4 2400MHz Memory (128GB Sytem Memory)
• 1x 512GB SSD
• 2x Intel Xeon E5-2620 v4 CPU's
• 8x NVIDIA Tesla P40 24GB GDDR5
• 64 GB 1600MHz system memory
• CentOS 7
• 9U cluster; 1U head node (Dual E5-2660 v3 CPUs, 64GB DDR4)
• 2x Intel Xeon E5-2660 v3 CPU's per node
• 4x NVIDIA Tesla P100 Pascal GPU's per node
• 8x 16GB DDR4 2400 MHz Memory (128FB System Memory)
• InfiniBand QDR Switch & HCA's
• Bright Computing Cluster Manager
Ready to see your performance gains on Exxact GPU solutions?
Sign up now and try for free.